initial implementation

This commit is contained in:
Roland Conybeare 2023-10-23 20:16:01 -04:00
commit c7c29daf5e
7 changed files with 201 additions and 0 deletions

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# xo_pydistribution/src/pydistribution/CMakeLists.txt
set(SELF_LIB pydistribution)
set(SELF_SRCS pydistribution.cpp)
xo_pybind11_library(${SELF_LIB} ${PROJECT_NAME}Targets ${SELF_SRCS})
xo_pybind11_dependency(${SELF_LIB} xo_distribution)

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/* @file pydistribution.cpp */
#include "pydistribution.hpp"
#include "xo/distribution/Normal.hpp"
#include "xo/distribution/ExplicitDist.hpp"
#include "xo/reflect/SelfTagging.hpp"
#include "xo/pyutil/pyutil.hpp"
#include <pybind11/pybind11.h>
#include <pybind11/stl.h>
namespace xo {
using xo::distribution::Normal;
using xo::distribution::Distribution;
using xo::distribution::ExplicitDist;
using xo::ref::rp;
namespace sim {
namespace py = pybind11;
PYBIND11_MODULE(PYDISTRIBUTION_MODULE_NAME(), m) {
m.doc() = "pybind11 distribution plugin"; // optional module docstring
m.def("normalcdf",
&Normal::cdf_impl,
"cumulative normal distribution",
py::arg("x"));
py::class_<Distribution<double>,
rp<Distribution<double>>>(m, "Distribution")
.def("cdf", &Distribution<double>::cdf,
"return cumulative distribution function at x",
py::arg("x"));
py::class_<ExplicitDist<double>,
Distribution<double>,
rp<ExplicitDist<double>>>(m, "ExplicitDist")
.def_static("make", &ExplicitDist<double>::make,
"create instance",
py::arg("bucket_dx"), py::arg("ref_value"))
.def_static("make_n", &ExplicitDist<double>::make_n,
"create instance with n buckets",
py::arg("n"), py::arg("bucket_dx"), py::arg("ref_value"))
.def("n_bucket", &ExplicitDist<double>::n_bucket,
"return number of explicitly-represented buckets in distribution")
.def("lo", &ExplicitDist<double>::lo,
"return least upper bound x: cdf(x)=0")
.def("hi", &ExplicitDist<double>::hi,
"return greatest lower bound x: cdf(x)=1")
.def("density", &ExplicitDist<double>::density,
"return probability density at x",
py::arg("x"))
.def("density_v", &ExplicitDist<double>::density_v,
"return probability density vector for all explicit buckets."
" each member is pair {lh bucket edge, density}")
.def("signed_bucket_index", &ExplicitDist<double>::signed_bucket_index,
"signed index to probability bucket. ref_value -> 0",
py::arg("x"))
.def("scale_bucket", &ExplicitDist<double>::scale_bucket,
"scale probability weight in bucket containing x by k",
py::arg("x"), py::arg("k"))
.def("scale_by_normal_cdf", &ExplicitDist<double>::scale_by_normal_cdf,
"scale by normal cumulative distribution N(sign.(x-mean)/sigma)."
" expect sign in {+1, -1}",
py::arg("sign"), py::arg("mean"), py::arg("sigma"))
.def("renormalize", &ExplicitDist<double>::renormalize,
"renormalize to ensure sum of weights=1")
.def("check_renormalize", &ExplicitDist<double>::check_renormalize,
"renormalize if needed, otherwise do nothing")
.def("__repr__", &ExplicitDist<double>::display_string);
}
} /*namespace sim*/
} /*namespace xo*/
/* end pydistribution.cpp */

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/* @file pydistribution.hpp
*
* automatically generated from src/pydistribution/pydistribution.hpp.in
* see src/pydistribution/CMakeLists.txt
*/
/* python requires module name = library name
* example:
* PYBIND11_MODULE(PYDISTRIBUTION_MODULE_NAME(), m) { ... }
*/
#define PYDISTRIBUTION_MODULE_NAME() @SELF_LIB@
/* example:
* py::module_::import(PYDISTRIBUTION_MODULE_NAME_STR)
*/
#define PYDISTRIBUTION_MODULE_NAME_STR "@SELF_LIB@"
/* example:
* PYDISTRIBUTION_IMPORT_MODULE()
* replaces
* py::module_::import("pydistribution")
*/
#define PYDISTRIBUTION_IMPORT_MODULE() py::module_::import("@SELF_LIB@")
/* end pydistribution.hpp */